1. TFARM::DELTA
    Contains the delta variations of support, confidence and lift.
    csv| json| rda| rds
    list
  2. TFARM::IMP
    Contains the mean Importance Index of each co-regulator.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|12 x 4
  3. TFARM::IMP_Z
    Contains the Importance Index associated with each co-regulator which is present in at least one association rule.
    json| rda| rds
    list
  4. TFARM::I_c_2
    Contains the mean Importance Index of pairs of transcription factors which are present in at least one association rule.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|67 x 2
  5. TFARM::MCF7_chr1
    Contains genomic regions in the first chromosome of the MCF-7 human breast adenocarcinoma cell line at the ranges side, and the presence indexes of transcription factors in such regions at the metadata side.
    rda| rds
    GRanges
  6. TFARM::TF_Imp
    Contains the candidate co-regulators and the number of rules associated with them.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|12 x 3
  7. TFARM::imp_FOSL2
    Contains the set of Importance Indexes of FOSL2 in a given set of rules.
    json| rda| rds
    list
  8. TFARM::p_TFs
    Contains co-regulators found in at least one association rule.
    json| rda| rds
    character
  9. TFARM::r_FOSL2
    Represents an example of rulesTF output, i.e. the subset of rules whose left-hand-sides contain FOSL2, and the correspondent quality measures.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|28 x 5
  10. TFARM::r_TEAD4
    Contains the association rules for the prediction of the presence of the transcription factor TEAD4 in the considered genomic regions, i.e., with TEAD4 in the right-hand-side of the association rules.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|30 x 6
  11. TFARM::r_noFOSL2
    Represents an example of rulesTF0 output, where the presence of FOSL2 was replaced with its absence.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|28 x 5